Table 5 List of APOL1 3′ untranslated region (3’UTR) haplotypes generated by Tag SNP, which presenting a global frequency higher than 1% considering all populations of the 1000Genomes Project (Phase 3)
From: The analysis of APOL1 genetic variation and haplotype diversity provided by 1000 Genomes project
Chr22 | Tag SNP | APOL1 position | UTR-1 | UTR-2 | UTR-3 | UTR-4 | UTR-5 |
|---|---|---|---|---|---|---|---|
36266331 | rs9610473 | 13261 | T | T | C | T | T |
36266608 | rs66473469 | 13538 | A | A | A | A | C |
36266702 | rs5750246 | 13632 | A | G | A | G | A |
36267202 | rs78523 | 14132 | G | A | G | G | G |
Global frequency, n = 2504 | 0.68358 | 0.12093 | 0.07079 | 0.06682 | 0.05027 | ||