Table 7 List of APOL1 coding haplotypes generated by Tag SNP, which presenting a global frequency higher than 1% considering all populations of the 1000 Genomes Project (Phase 3)
From: The analysis of APOL1 genetic variation and haplotype diversity provided by 1000 Genomes project
Chr22 | Tag SNP | APOL1 position | H-1 | H-2 | H-3 |
|---|---|---|---|---|---|
36261694 | rs41297245 | 8624 | G | G | A |
36265363 | rs116136671 | 12293 | A | A | A |
36265490 | rs136174 | 12420 | A | C | A |
36265520 | rs136175 | 12450 | A | G | A |
36265600 | rs136176 | 12530 | A | G | A |
36265796 | rs136177 | 12726 | A | G | A |
36265845 | rs16996616 | 12775 | G | G | G |
Global frequency, n = 2504 | 0.79577 | 0.13438 | 0.02977 | ||