Table 1 The ChIP-Seq database found that these SNPs may affect NF-κB binding ability
Chromosome: Location | SNPs | Call rate | MAF | DNA sequence near the SNP |
|---|---|---|---|---|
1:11229433 | rs17036427 | 100.0% | 8.07% (G → C) | AAAGGCAGG[G/C]ATTTTCCCC |
1:19372561 | rs79143300 | 99.7% | 8.20% (G → T) | CAATGTGGC[G/T]GGAATTTCC |
2:203037846 | rs76552560 | 99.5% | 13.46% (G → A) | AAGTCCCCC[G/A]GGAAGTCCC |
3:14693650 | rs7651075 | 99.7% | 49.40% (G → A) | CCGTGGGTT[G/A]GGAAACTCC |
6:44032378 | rs59118205 | 99.7% | 5.94% (C → T) | GGGGTTTCC[C/T]CACCATGAT |
6:53820994 | rs9395890 | 99.9% | 41.57% (T → G) | GTGACAGCT[T/G]GGAAGTCCC |
11:30344883 | rs11826681 | 91.6% | 41.57% (C → G) | CGTGAGGGG[C/G]ATTTCCAGC |
11:85506994 | rs11234413 | 100.0% | 9.73% (G → A) | CATCACCAG[G/A]GGAATCTCC |
11:94465585 | rs2851583 | 99.9% | 5.72% (A → G) | TTCTGAAGG[A/G]AAGTCCCTC |
16:1275896 | rs9925427 | 99.3% | 12.58% (A → G) | GCAGCGCCC[A/G]GGACTTTCC |
16:81444782 | rs78229468 | 95.5% | 8.61% (A → G) | TGCTGCTGG[A/G]AAGTTCCTG |
16:86553836 | rs77836284 | 99.9% | 8.58% (C → T) | GGGGATTTC[C/T]CGCTCGGCT |
17:34219824 | rs3826454 | 99.8% | 10.50% (A → T) | CCCTTGGGG[A/T]ATTTCCTCA |
19:54398240 | rs67087171 | 100.0% | 11.53% (G → A) | TAGAAGGGC[G/A]GGATTTCCC |
22:29613441 | rs7284245 | 99.7% | 16.50% (G → T) | CTTGGGCCG[G/T]GGACTTCCC |