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Table 2 PCA/multivariate Analysis models for urine

From: Meprin β metalloproteases associated with differential metabolite profiles in the plasma and urine of mice with type 1 diabetes and diabetic nephropathy

 

Model

# of Compounds

Total # Samples

# of Components

R2X

R2Y

Q2

# Samples in STZ

# Samples in NaC

Positive

PCA All Samples

3513

54

5

0.781

 

0.663

  

PCA 4 wks

3513

24

2

0.711

 

0.627

  

PCA WT STZ v WT NaC 4 wk

3513

13

2

0.783

 

0.676

  

OPLSDA WT STZ v WT NaC 4 wk

3513

13

1 + 1

0.775

0.993

0.981

9

4

PCA βKO STZ v βKO NaC 4wk

3513

11

2

0.770

 

0.634

  

OPLSDA βKO STZ v βKO NaC 4wk

3513

11

1 + 0

0.598

0.596

0.444

8

3

PCA 8 wks

3513

24

4

0.803

 

0.641

  

PCA WT STZ v WT NaC 8 wk

3513

13

2

0.774

 

0.648

  

OPLSDA WT STZ v WT NaC 8 wk

3513

13

1 + 1

0.642

0.937

0.916

8

5

PCA βKO STZ v βKO NaC 8wk

3513

11

3

0.839

 

0.546

  

OPLSDA βKO STZ v βKO NaC 8wk

3513

11

1 + 4

0.893

0.999

0.841

6

5

Negative

PCA All Samples

4116

53

8

0.753

 

0.486

  

PCA 4 wks

4116

24

4

0.692

 

0.477

  

PCA WT STZ v WT NaC 4 wk

4116

13

2

0.632

 

0.453

  

OPLSDA WT STZ v WT NaC 4 wk

4116

13

1 + 3

0.73

1

0.983

9

4

PCA βKO STZ v βKO NaC 4wk

4116

11

2

0.566

 

0.254

  

OPLSDA βKO STZ v βKO NaC 4wk

4116

11

1 + 0

0.333

0.644

0.451

8

3

PCA 8 wk

4116

24

4

0.646

 

0.327

  

PCA WT STZ v WT NaC 8 wk

4116

13

4

0.767

 

0.311

  

OPLSDA WT STZ v WT NaC 8 wk

4116

13

1 + 0

0.409

0.953

0.921

8

5

PCA βKO STZ v βKO NaC 8wk

4116

11

2

0.574

 

0.174

  

OPLSDA βKO STZ v βKO NaC 8wk

4116

11

1 + 6

0.894

1

0.816

6

5